Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm9172-201ENSMUST00000212092 954 ntBASIC17.4■□□□□ 0.38
Mmp3P28862 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.4■□□□□ 0.38
Mmp3P28862 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Mmp3P28862 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.39■□□□□ 0.38
Mmp3P28862 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mmp3P28862 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.39■□□□□ 0.37
Mmp3P28862 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.39■□□□□ 0.37
Mmp3P28862 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.39■□□□□ 0.37
Mmp3P28862 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp3P28862 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.39■□□□□ 0.37
Mmp3P28862 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Mmp3P28862 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp3P28862 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp3P28862 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.38■□□□□ 0.37
Mmp3P28862 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Mir6404-201ENSMUST00000183699 94 ntBASIC17.38■□□□□ 0.37
Mmp3P28862 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.38■□□□□ 0.37
Mmp3P28862 Gm18206-201ENSMUST00000207027 926 ntBASIC17.38■□□□□ 0.37
Mmp3P28862 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mmp3P28862 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mmp3P28862 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp3P28862 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp3P28862 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Gm12350-201ENSMUST00000121208 462 ntBASIC17.37■□□□□ 0.37
Mmp3P28862 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.37■□□□□ 0.37
Mmp3P28862 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.37■□□□□ 0.37
Mmp3P28862 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Mmp3P28862 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp3P28862 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp3P28862 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Mmp3P28862 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.36■□□□□ 0.37
Mmp3P28862 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Mmp3P28862 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Gm7230-201ENSMUST00000173026 815 ntBASIC17.36■□□□□ 0.37
Mmp3P28862 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Mmp3P28862 Gm27525-201ENSMUST00000184465 107 ntBASIC17.36■□□□□ 0.37
Mmp3P28862 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.36■□□□□ 0.37
Mmp3P28862 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp3P28862 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp3P28862 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms