Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RxrbP28704 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RxrbP28704 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.38■□□□□ 0.21
RxrbP28704 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RxrbP28704 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.37■□□□□ 0.21
RxrbP28704 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
RxrbP28704 Gm10698-201ENSMUST00000182663 604 ntBASIC16.37■□□□□ 0.21
RxrbP28704 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.37■□□□□ 0.21
RxrbP28704 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 BC037039-201ENSMUST00000192003 2205 ntBASIC16.37■□□□□ 0.21
RxrbP28704 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RxrbP28704 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RxrbP28704 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
RxrbP28704 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.36■□□□□ 0.21
RxrbP28704 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.36■□□□□ 0.21
RxrbP28704 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RxrbP28704 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RxrbP28704 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.36■□□□□ 0.21
RxrbP28704 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RxrbP28704 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RxrbP28704 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
RxrbP28704 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.35■□□□□ 0.21
RxrbP28704 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RxrbP28704 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.35■□□□□ 0.21
RxrbP28704 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RxrbP28704 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.35■□□□□ 0.21
RxrbP28704 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.35■□□□□ 0.21
RxrbP28704 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.35■□□□□ 0.21
RxrbP28704 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RxrbP28704 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RxrbP28704 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RxrbP28704 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
RxrbP28704 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RxrbP28704 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.34■□□□□ 0.21
RxrbP28704 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RxrbP28704 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.34■□□□□ 0.21
RxrbP28704 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.34■□□□□ 0.21
RxrbP28704 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.34■□□□□ 0.21
RxrbP28704 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.34■□□□□ 0.21
RxrbP28704 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RxrbP28704 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RxrbP28704 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms