Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Col2a1P28481 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Col2a1P28481 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.39■□□□□ 0.53
Col2a1P28481 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.39■□□□□ 0.53
Col2a1P28481 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.39■□□□□ 0.53
Col2a1P28481 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Gm15358-201ENSMUST00000119249 520 ntBASIC18.39■□□□□ 0.53
Col2a1P28481 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.39■□□□□ 0.53
Col2a1P28481 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Col2a1P28481 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Gm37935-201ENSMUST00000192012 982 ntBASIC18.39■□□□□ 0.53
Col2a1P28481 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col2a1P28481 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.38■□□□□ 0.53
Col2a1P28481 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Col2a1P28481 Gm15467-201ENSMUST00000120582 445 ntBASIC18.38■□□□□ 0.53
Col2a1P28481 Gm25925-201ENSMUST00000158314 306 ntBASIC18.38■□□□□ 0.53
Col2a1P28481 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col2a1P28481 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Col2a1P28481 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col2a1P28481 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.37■□□□□ 0.53
Col2a1P28481 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Col2a1P28481 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Col2a1P28481 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Col2a1P28481 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Col2a1P28481 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.37■□□□□ 0.53
Col2a1P28481 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col2a1P28481 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.37■□□□□ 0.53
Col2a1P28481 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.37■□□□□ 0.53
Col2a1P28481 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col2a1P28481 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Col2a1P28481 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.36■□□□□ 0.53
Col2a1P28481 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col2a1P28481 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col2a1P28481 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col2a1P28481 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col2a1P28481 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col2a1P28481 Gm5264-201ENSMUST00000190584 848 ntBASIC18.35■□□□□ 0.53
Col2a1P28481 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col2a1P28481 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col2a1P28481 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.35■□□□□ 0.53
Col2a1P28481 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col2a1P28481 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Col2a1P28481 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms