Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col8a2P25318 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Col8a2P25318 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col8a2P25318 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col8a2P25318 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.59□□□□□ -0.23
Col8a2P25318 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.59□□□□□ -0.23
Col8a2P25318 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col8a2P25318 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col8a2P25318 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.59□□□□□ -0.23
Col8a2P25318 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.59□□□□□ -0.23
Col8a2P25318 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col8a2P25318 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col8a2P25318 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col8a2P25318 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Col8a2P25318 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col8a2P25318 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.58□□□□□ -0.24
Col8a2P25318 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Col8a2P25318 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.58□□□□□ -0.24
Col8a2P25318 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.58□□□□□ -0.24
Col8a2P25318 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Col8a2P25318 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.58□□□□□ -0.24
Col8a2P25318 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Col8a2P25318 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col8a2P25318 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col8a2P25318 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Col8a2P25318 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col8a2P25318 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.57□□□□□ -0.24
Col8a2P25318 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Col8a2P25318 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.57□□□□□ -0.24
Col8a2P25318 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col8a2P25318 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.57□□□□□ -0.24
Col8a2P25318 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.57□□□□□ -0.24
Col8a2P25318 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col8a2P25318 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col8a2P25318 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col8a2P25318 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col8a2P25318 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col8a2P25318 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Col8a2P25318 Gm7153-201ENSMUST00000117092 455 ntBASIC13.56□□□□□ -0.24
Col8a2P25318 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.56□□□□□ -0.24
Col8a2P25318 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Col8a2P25318 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Col8a2P25318 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Col8a2P25318 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.56□□□□□ -0.24
Col8a2P25318 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.56□□□□□ -0.24
Col8a2P25318 Birc2-201ENSMUST00000054878 378 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms