Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cbx3P23198 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cbx3P23198 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cbx3P23198 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cbx3P23198 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cbx3P23198 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.9□□□□□ -0.02
Cbx3P23198 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.9□□□□□ -0.02
Cbx3P23198 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cbx3P23198 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.9□□□□□ -0.02
Cbx3P23198 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.9□□□□□ -0.02
Cbx3P23198 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.9□□□□□ -0.02
Cbx3P23198 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.9□□□□□ -0.02
Cbx3P23198 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Cbx3P23198 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cbx3P23198 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cbx3P23198 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cbx3P23198 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.89□□□□□ -0.03
Cbx3P23198 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.89□□□□□ -0.03
Cbx3P23198 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.89□□□□□ -0.03
Cbx3P23198 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cbx3P23198 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.89□□□□□ -0.03
Cbx3P23198 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.89□□□□□ -0.03
Cbx3P23198 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cbx3P23198 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.88□□□□□ -0.03
Cbx3P23198 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Cbx3P23198 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.88□□□□□ -0.03
Cbx3P23198 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.88□□□□□ -0.03
Cbx3P23198 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.88□□□□□ -0.03
Cbx3P23198 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.88□□□□□ -0.03
Cbx3P23198 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cbx3P23198 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cbx3P23198 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.87□□□□□ -0.03
Cbx3P23198 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cbx3P23198 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cbx3P23198 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cbx3P23198 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cbx3P23198 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cbx3P23198 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms