Protein–RNA interactions for Protein: P16546

Sptan1, Spectrin alpha chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1P16546 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sptan1P16546 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sptan1P16546 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sptan1P16546 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sptan1P16546 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sptan1P16546 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sptan1P16546 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sptan1P16546 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.06□□□□□ -0.16
Sptan1P16546 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Sptan1P16546 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.06□□□□□ -0.16
Sptan1P16546 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.06□□□□□ -0.16
Sptan1P16546 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sptan1P16546 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.06□□□□□ -0.16
Sptan1P16546 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Gm11764-201ENSMUST00000120221 623 ntBASIC14.06□□□□□ -0.16
Sptan1P16546 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Sptan1P16546 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.06□□□□□ -0.16
Sptan1P16546 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sptan1P16546 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sptan1P16546 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Sptan1P16546 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.05□□□□□ -0.16
Sptan1P16546 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.05□□□□□ -0.16
Sptan1P16546 Mir8112-201ENSMUST00000184382 131 ntBASIC14.05□□□□□ -0.16
Sptan1P16546 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.05□□□□□ -0.16
Sptan1P16546 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.05□□□□□ -0.16
Sptan1P16546 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sptan1P16546 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sptan1P16546 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sptan1P16546 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.05□□□□□ -0.16
Sptan1P16546 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.05□□□□□ -0.16
Sptan1P16546 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sptan1P16546 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sptan1P16546 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sptan1P16546 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.04□□□□□ -0.16
Sptan1P16546 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.04□□□□□ -0.16
Sptan1P16546 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.04□□□□□ -0.16
Sptan1P16546 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sptan1P16546 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.03□□□□□ -0.16
Sptan1P16546 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.03□□□□□ -0.16
Sptan1P16546 Gm5312-201ENSMUST00000203728 547 ntBASIC14.03□□□□□ -0.16
Sptan1P16546 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sptan1P16546 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sptan1P16546 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms