Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Hoxc6P10629 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hoxc6P10629 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hoxc6P10629 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Hoxc6P10629 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.04■□□□□ 0.48
Hoxc6P10629 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.04■□□□□ 0.48
Hoxc6P10629 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.04■□□□□ 0.48
Hoxc6P10629 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Hoxc6P10629 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hoxc6P10629 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
Hoxc6P10629 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hoxc6P10629 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 Gm11764-201ENSMUST00000120221 623 ntBASIC18.03■□□□□ 0.48
Hoxc6P10629 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.03■□□□□ 0.48
Hoxc6P10629 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.03■□□□□ 0.48
Hoxc6P10629 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Hoxc6P10629 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Hoxc6P10629 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hoxc6P10629 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc6P10629 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc6P10629 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc6P10629 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Mir6404-201ENSMUST00000183699 94 ntBASIC18.02■□□□□ 0.48
Hoxc6P10629 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.02■□□□□ 0.48
Hoxc6P10629 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.02■□□□□ 0.48
Hoxc6P10629 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.02■□□□□ 0.48
Hoxc6P10629 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hoxc6P10629 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc6P10629 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hoxc6P10629 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.01■□□□□ 0.47
Hoxc6P10629 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.01■□□□□ 0.47
Hoxc6P10629 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Hoxc6P10629 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.01■□□□□ 0.47
Hoxc6P10629 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.01■□□□□ 0.47
Hoxc6P10629 Mir8117-201ENSMUST00000184773 107 ntBASIC18.01■□□□□ 0.47
Hoxc6P10629 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hoxc6P10629 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hoxc6P10629 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18■□□□□ 0.47
Hoxc6P10629 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18■□□□□ 0.47
Hoxc6P10629 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18■□□□□ 0.47
Hoxc6P10629 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Hoxc6P10629 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hoxc6P10629 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hoxc6P10629 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Hoxc6P10629 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.99■□□□□ 0.47
Hoxc6P10629 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.99■□□□□ 0.47
Hoxc6P10629 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.99■□□□□ 0.47
Hoxc6P10629 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hoxc6P10629 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hoxc6P10629 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms