Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.94□□□□□ -0.5
P06328 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
P06328 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P06328 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.93□□□□□ -0.5
P06328 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.93□□□□□ -0.5
P06328 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
P06328 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P06328 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.93□□□□□ -0.5
P06328 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.93□□□□□ -0.5
P06328 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.93□□□□□ -0.5
P06328 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.93□□□□□ -0.5
P06328 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.93□□□□□ -0.5
P06328 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.93□□□□□ -0.5
P06328 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
P06328 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
P06328 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.93□□□□□ -0.5
P06328 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.93□□□□□ -0.5
P06328 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P06328 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.92□□□□□ -0.5
P06328 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
P06328 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P06328 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Gm11539-201ENSMUST00000119837 557 ntBASIC11.92□□□□□ -0.5
P06328 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.92□□□□□ -0.5
P06328 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
P06328 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P06328 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P06328 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
P06328 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P06328 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.91□□□□□ -0.5
P06328 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.91□□□□□ -0.5
P06328 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
P06328 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
P06328 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.91□□□□□ -0.5
P06328 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
P06328 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.91□□□□□ -0.5
P06328 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.91□□□□□ -0.5
P06328 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
P06328 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P06328 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms