Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CfdP03953 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CfdP03953 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CfdP03953 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CfdP03953 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CfdP03953 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.64□□□□□ -0.23
CfdP03953 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Gm13158-201ENSMUST00000122007 736 ntBASIC13.64□□□□□ -0.23
CfdP03953 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CfdP03953 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CfdP03953 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CfdP03953 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CfdP03953 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CfdP03953 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.63□□□□□ -0.23
CfdP03953 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CfdP03953 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CfdP03953 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Gm12896-201ENSMUST00000118430 226 ntBASIC13.63□□□□□ -0.23
CfdP03953 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.63□□□□□ -0.23
CfdP03953 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.63□□□□□ -0.23
CfdP03953 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CfdP03953 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.63□□□□□ -0.23
CfdP03953 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CfdP03953 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CfdP03953 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.63□□□□□ -0.23
CfdP03953 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CfdP03953 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CfdP03953 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CfdP03953 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.62□□□□□ -0.23
CfdP03953 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CfdP03953 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.62□□□□□ -0.23
CfdP03953 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CfdP03953 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CfdP03953 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CfdP03953 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CfdP03953 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms