Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.89□□□□□ -0.03
P01852 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.89□□□□□ -0.03
P01852 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.89□□□□□ -0.03
P01852 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
P01852 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
P01852 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
P01852 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
P01852 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
P01852 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.88□□□□□ -0.03
P01852 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
P01852 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
P01852 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.88□□□□□ -0.03
P01852 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.88□□□□□ -0.03
P01852 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
P01852 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
P01852 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
P01852 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
P01852 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
P01852 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
P01852 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
P01852 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
P01852 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.86□□□□□ -0.03
P01852 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.86□□□□□ -0.03
P01852 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.86□□□□□ -0.03
P01852 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
P01852 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.86□□□□□ -0.03
P01852 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
P01852 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
P01852 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
P01852 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
P01852 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms