Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
TcraP01849 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Gm2399-201ENSMUST00000104944 225 ntBASIC11.94□□□□□ -0.5
TcraP01849 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
TcraP01849 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.94□□□□□ -0.5
TcraP01849 Gm13401-201ENSMUST00000117074 291 ntBASIC11.94□□□□□ -0.5
TcraP01849 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Gm38285-201ENSMUST00000192928 922 ntBASIC11.94□□□□□ -0.5
TcraP01849 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.94□□□□□ -0.5
TcraP01849 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.94□□□□□ -0.5
TcraP01849 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.94□□□□□ -0.5
TcraP01849 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.94□□□□□ -0.5
TcraP01849 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.93□□□□□ -0.5
TcraP01849 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.93□□□□□ -0.5
TcraP01849 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
TcraP01849 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TcraP01849 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TcraP01849 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TcraP01849 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TcraP01849 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.92□□□□□ -0.5
TcraP01849 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.92□□□□□ -0.5
TcraP01849 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.92□□□□□ -0.5
TcraP01849 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TcraP01849 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.91□□□□□ -0.5
TcraP01849 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
TcraP01849 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TcraP01849 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms