Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cldn1O88551 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.94□□□□□ -0.18
Cldn1O88551 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.94□□□□□ -0.18
Cldn1O88551 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.94□□□□□ -0.18
Cldn1O88551 Gm8969-201ENSMUST00000199694 526 ntBASIC13.94□□□□□ -0.18
Cldn1O88551 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.94□□□□□ -0.18
Cldn1O88551 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Cldn1O88551 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cldn1O88551 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cldn1O88551 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.94□□□□□ -0.18
Cldn1O88551 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.93□□□□□ -0.18
Cldn1O88551 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cldn1O88551 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Cldn1O88551 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Gm23935-201ENSMUST00000102303 57 ntBASIC13.93□□□□□ -0.18
Cldn1O88551 Gm24270-201ENSMUST00000102326 57 ntBASIC13.93□□□□□ -0.18
Cldn1O88551 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.93□□□□□ -0.18
Cldn1O88551 Gm24245-201ENSMUST00000157318 57 ntBASIC13.93□□□□□ -0.18
Cldn1O88551 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Cldn1O88551 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cldn1O88551 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cldn1O88551 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cldn1O88551 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.93□□□□□ -0.18
Cldn1O88551 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldn1O88551 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.92□□□□□ -0.18
Cldn1O88551 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Cldn1O88551 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cldn1O88551 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.92□□□□□ -0.18
Cldn1O88551 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.92□□□□□ -0.18
Cldn1O88551 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.92□□□□□ -0.18
Cldn1O88551 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cldn1O88551 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.91□□□□□ -0.18
Cldn1O88551 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.91□□□□□ -0.18
Cldn1O88551 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Cldn1O88551 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.91□□□□□ -0.18
Cldn1O88551 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.91□□□□□ -0.18
Cldn1O88551 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.91□□□□□ -0.18
Cldn1O88551 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cldn1O88551 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.91□□□□□ -0.18
Cldn1O88551 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms