Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.61□□□□□ -0.07
Cops3O88543 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cops3O88543 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cops3O88543 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cops3O88543 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cops3O88543 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cops3O88543 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.6□□□□□ -0.07
Cops3O88543 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cops3O88543 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cops3O88543 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cops3O88543 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.6□□□□□ -0.07
Cops3O88543 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.6□□□□□ -0.07
Cops3O88543 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.6□□□□□ -0.07
Cops3O88543 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cops3O88543 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cops3O88543 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cops3O88543 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.6□□□□□ -0.07
Cops3O88543 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.6□□□□□ -0.07
Cops3O88543 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cops3O88543 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Cops3O88543 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.59□□□□□ -0.07
Cops3O88543 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Cops3O88543 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Gm29257-201ENSMUST00000186115 639 ntBASIC14.59□□□□□ -0.07
Cops3O88543 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.59□□□□□ -0.07
Cops3O88543 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.59□□□□□ -0.07
Cops3O88543 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.59□□□□□ -0.07
Cops3O88543 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cops3O88543 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cops3O88543 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cops3O88543 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cops3O88543 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.58□□□□□ -0.07
Cops3O88543 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.58□□□□□ -0.07
Cops3O88543 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cops3O88543 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.58□□□□□ -0.08
Cops3O88543 Gm13168-201ENSMUST00000121771 632 ntBASIC14.58□□□□□ -0.08
Cops3O88543 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.58□□□□□ -0.08
Cops3O88543 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.58□□□□□ -0.08
Cops3O88543 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cops3O88543 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cops3O88543 Gm20760-201ENSMUST00000179197 648 ntBASIC14.58□□□□□ -0.08
Cops3O88543 Gm3375-201ENSMUST00000203929 796 ntBASIC14.58□□□□□ -0.08
Cops3O88543 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.58□□□□□ -0.08
Cops3O88543 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cops3O88543 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cops3O88543 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.58□□□□□ -0.08
Cops3O88543 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cops3O88543 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cops3O88543 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms