Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.41■□□□□ 0.38
ChkbO55229 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ChkbO55229 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ChkbO55229 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
ChkbO55229 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.41■□□□□ 0.38
ChkbO55229 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ChkbO55229 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.4■□□□□ 0.38
ChkbO55229 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ChkbO55229 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ChkbO55229 Gm15565-201ENSMUST00000118890 427 ntBASIC17.4■□□□□ 0.38
ChkbO55229 Gm12085-201ENSMUST00000119263 940 ntBASIC17.4■□□□□ 0.38
ChkbO55229 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
ChkbO55229 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.4■□□□□ 0.38
ChkbO55229 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ChkbO55229 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ChkbO55229 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
ChkbO55229 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ChkbO55229 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ChkbO55229 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ChkbO55229 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ChkbO55229 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.39■□□□□ 0.37
ChkbO55229 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.39■□□□□ 0.37
ChkbO55229 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.39■□□□□ 0.37
ChkbO55229 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.39■□□□□ 0.37
ChkbO55229 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ChkbO55229 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.39■□□□□ 0.37
ChkbO55229 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ChkbO55229 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ChkbO55229 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ChkbO55229 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.38■□□□□ 0.37
ChkbO55229 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.38■□□□□ 0.37
ChkbO55229 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.38■□□□□ 0.37
ChkbO55229 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.38■□□□□ 0.37
ChkbO55229 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.38■□□□□ 0.37
ChkbO55229 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ChkbO55229 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.38■□□□□ 0.37
ChkbO55229 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ChkbO55229 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ChkbO55229 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms