Protein–RNA interactions for Protein: O55125

Nipsnap1, Protein NipSnap homolog 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap1O55125 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 App-207ENSMUST00000227737 2827 ntBASIC14.17□□□□□ -0.14
Nipsnap1O55125 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.17□□□□□ -0.14
Nipsnap1O55125 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.17□□□□□ -0.14
Nipsnap1O55125 Gm43183-201ENSMUST00000200632 547 ntBASIC14.17□□□□□ -0.14
Nipsnap1O55125 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nipsnap1O55125 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Nipsnap1O55125 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Nipsnap1O55125 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Gm20049-201ENSMUST00000219950 730 ntBASIC14.16□□□□□ -0.14
Nipsnap1O55125 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nipsnap1O55125 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.15□□□□□ -0.14
Nipsnap1O55125 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.15□□□□□ -0.14
Nipsnap1O55125 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nipsnap1O55125 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.15□□□□□ -0.14
Nipsnap1O55125 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nipsnap1O55125 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.14□□□□□ -0.15
Nipsnap1O55125 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.14□□□□□ -0.15
Nipsnap1O55125 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.14□□□□□ -0.15
Nipsnap1O55125 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap1O55125 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap1O55125 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap1O55125 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap1O55125 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nipsnap1O55125 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms