Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm44466-201ENSMUST00000200264 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44359-201ENSMUST00000200671 138 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.75□□□□□ -0.21
Cxcl13O55038 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.75□□□□□ -0.21
Cxcl13O55038 Gm6296-201ENSMUST00000222599 943 ntBASIC13.75□□□□□ -0.21
Cxcl13O55038 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.75□□□□□ -0.21
Cxcl13O55038 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl13O55038 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cxcl13O55038 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cxcl13O55038 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.74□□□□□ -0.21
Cxcl13O55038 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Gm18733-201ENSMUST00000173950 856 ntBASIC13.74□□□□□ -0.21
Cxcl13O55038 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cxcl13O55038 Gm7506-201ENSMUST00000207758 815 ntBASIC13.74□□□□□ -0.21
Cxcl13O55038 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.74□□□□□ -0.21
Cxcl13O55038 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cxcl13O55038 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl13O55038 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.74□□□□□ -0.21
Cxcl13O55038 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.74□□□□□ -0.21
Cxcl13O55038 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.73□□□□□ -0.21
Cxcl13O55038 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Gm7862-201ENSMUST00000121461 292 ntBASIC13.73□□□□□ -0.21
Cxcl13O55038 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.73□□□□□ -0.21
Cxcl13O55038 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cxcl13O55038 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl13O55038 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.72□□□□□ -0.21
Cxcl13O55038 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cxcl13O55038 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.72□□□□□ -0.21
Cxcl13O55038 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cxcl13O55038 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cxcl13O55038 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cxcl13O55038 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.72□□□□□ -0.21
Cxcl13O55038 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.72□□□□□ -0.21
Cxcl13O55038 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.72□□□□□ -0.21
Cxcl13O55038 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.72□□□□□ -0.21
Cxcl13O55038 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl13O55038 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.72□□□□□ -0.21
Cxcl13O55038 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms