Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.8■□□□□ 0.44
Sptlc1O35704 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sptlc1O35704 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sptlc1O35704 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sptlc1O35704 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sptlc1O35704 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.79■□□□□ 0.44
Sptlc1O35704 Gm4535-201ENSMUST00000182274 558 ntBASIC17.79■□□□□ 0.44
Sptlc1O35704 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sptlc1O35704 Gm10355-201ENSMUST00000097146 517 ntBASIC17.79■□□□□ 0.44
Sptlc1O35704 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sptlc1O35704 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sptlc1O35704 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.78■□□□□ 0.44
Sptlc1O35704 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sptlc1O35704 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Sptlc1O35704 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.78■□□□□ 0.44
Sptlc1O35704 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.78■□□□□ 0.44
Sptlc1O35704 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sptlc1O35704 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Sptlc1O35704 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.78■□□□□ 0.44
Sptlc1O35704 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sptlc1O35704 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.77■□□□□ 0.44
Sptlc1O35704 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sptlc1O35704 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sptlc1O35704 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.77■□□□□ 0.44
Sptlc1O35704 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.77■□□□□ 0.44
Sptlc1O35704 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.77■□□□□ 0.44
Sptlc1O35704 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sptlc1O35704 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sptlc1O35704 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sptlc1O35704 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sptlc1O35704 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.76■□□□□ 0.43
Sptlc1O35704 Mir5126-201ENSMUST00000175513 77 ntBASIC17.76■□□□□ 0.43
Sptlc1O35704 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.76■□□□□ 0.43
Sptlc1O35704 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sptlc1O35704 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.76■□□□□ 0.43
Sptlc1O35704 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sptlc1O35704 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sptlc1O35704 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms