Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra3O35118 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gfra3O35118 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.06□□□□□ -0.16
Gfra3O35118 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.06□□□□□ -0.16
Gfra3O35118 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Gfra3O35118 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.06□□□□□ -0.16
Gfra3O35118 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.06□□□□□ -0.16
Gfra3O35118 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.06□□□□□ -0.16
Gfra3O35118 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.06□□□□□ -0.16
Gfra3O35118 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra3O35118 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gfra3O35118 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.06□□□□□ -0.16
Gfra3O35118 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Gfra3O35118 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.05□□□□□ -0.16
Gfra3O35118 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.05□□□□□ -0.16
Gfra3O35118 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.05□□□□□ -0.16
Gfra3O35118 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Gfra3O35118 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Gfra3O35118 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.05□□□□□ -0.16
Gfra3O35118 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Gfra3O35118 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra3O35118 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.04□□□□□ -0.16
Gfra3O35118 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Gfra3O35118 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gfra3O35118 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.04□□□□□ -0.16
Gfra3O35118 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Gm13312-201ENSMUST00000119631 718 ntBASIC14.04□□□□□ -0.16
Gfra3O35118 Gm12895-201ENSMUST00000122214 226 ntBASIC14.04□□□□□ -0.16
Gfra3O35118 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.04□□□□□ -0.16
Gfra3O35118 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.04□□□□□ -0.16
Gfra3O35118 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gfra3O35118 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.04□□□□□ -0.16
Gfra3O35118 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Gfra3O35118 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.04□□□□□ -0.16
Gfra3O35118 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Gfra3O35118 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra3O35118 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Gfra3O35118 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms