Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gm44466-201ENSMUST00000200264 138 ntBASIC13.97□□□□□ -0.17
Casp6O08738 Gm44359-201ENSMUST00000200671 138 ntBASIC13.97□□□□□ -0.17
Casp6O08738 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.97□□□□□ -0.17
Casp6O08738 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.97□□□□□ -0.17
Casp6O08738 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Casp6O08738 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Gm10355-201ENSMUST00000097146 517 ntBASIC13.97□□□□□ -0.17
Casp6O08738 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.97□□□□□ -0.17
Casp6O08738 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Casp6O08738 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.96□□□□□ -0.17
Casp6O08738 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.96□□□□□ -0.17
Casp6O08738 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.96□□□□□ -0.17
Casp6O08738 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.96□□□□□ -0.17
Casp6O08738 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Casp6O08738 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Casp6O08738 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Casp6O08738 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Casp6O08738 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Casp6O08738 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Casp6O08738 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Casp6O08738 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.95□□□□□ -0.18
Casp6O08738 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.95□□□□□ -0.18
Casp6O08738 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Gm25925-201ENSMUST00000158314 306 ntBASIC13.95□□□□□ -0.18
Casp6O08738 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.95□□□□□ -0.18
Casp6O08738 Mir5126-201ENSMUST00000175513 77 ntBASIC13.95□□□□□ -0.18
Casp6O08738 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.95□□□□□ -0.18
Casp6O08738 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.95□□□□□ -0.18
Casp6O08738 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.95□□□□□ -0.18
Casp6O08738 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Casp6O08738 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Casp6O08738 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Casp6O08738 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Casp6O08738 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.94□□□□□ -0.18
Casp6O08738 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Gm12350-201ENSMUST00000121208 462 ntBASIC13.94□□□□□ -0.18
Casp6O08738 Gm15173-201ENSMUST00000122049 433 ntBASIC13.94□□□□□ -0.18
Casp6O08738 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Gm7230-201ENSMUST00000173026 815 ntBASIC13.94□□□□□ -0.18
Casp6O08738 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Gm27525-201ENSMUST00000184465 107 ntBASIC13.94□□□□□ -0.18
Casp6O08738 Gm5364-201ENSMUST00000216789 889 ntBASIC13.94□□□□□ -0.18
Casp6O08738 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Casp6O08738 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms