Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc71lE9Q4T4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc71lE9Q4T4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc71lE9Q4T4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc71lE9Q4T4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc71lE9Q4T4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc71lE9Q4T4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc71lE9Q4T4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc71lE9Q4T4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.83□□□□□ -0.35
Ccdc71lE9Q4T4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc71lE9Q4T4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc71lE9Q4T4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Gm37292-201ENSMUST00000192062 758 ntBASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc71lE9Q4T4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc71lE9Q4T4 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms