Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm42569-201ENSMUST00000200539 472 ntBASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav3n-3A0A0G2JEM0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms