Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm5682-201ENSMUST00000173402 505 ntBASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.44■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm10175-201ENSMUST00000086013 645 ntBASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm14822-201ENSMUST00000122247 291 ntBASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm25911-201ENSMUST00000157621 56 ntBASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv16-104A0A0B4J1I1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv16-104A0A0B4J1I1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms