Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-47A0A0A6YY41 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm13559-201ENSMUST00000120476 863 ntBASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm10252-201ENSMUST00000209541 832 ntBASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ighv1-47A0A0A6YY41 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-47A0A0A6YY41 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ighv1-47A0A0A6YY41 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gm7370-201ENSMUST00000219471 767 ntBASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.44□□□□□ -0.26
Ighv1-47A0A0A6YY41 Mir6982-201ENSMUST00000184354 68 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms