Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13-4-dv7A0A075B6C2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm18666-201ENSMUST00000190039 958 ntBASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm12085-201ENSMUST00000119263 940 ntBASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm27000-201ENSMUST00000182943 842 ntBASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm20049-201ENSMUST00000219950 730 ntBASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm18958-201ENSMUST00000174258 762 ntBASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms