Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-4A0A075B6B4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Haglr-201ENSMUST00000100000 2085 ntBASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-4A0A075B6B4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav6-4A0A075B6B4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-4A0A075B6B4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms