Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Trmt13-210ENSMUST00000198454 880 ntBASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trdv1A0A075B657 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Actl10-202ENSMUST00000226583 1501 ntBASIC12.43□□□□□ -0.42
Trdv1A0A075B657 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trdv1A0A075B657 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gm12441-201ENSMUST00000121806 588 ntBASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trdv1A0A075B657 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdv1A0A075B657 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms