Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-4A0A075B652 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Gm30025-201ENSMUST00000218555 728 ntBASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-4A0A075B652 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-4A0A075B652 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-4A0A075B652 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms