Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm18115-201ENSMUST00000221209 621 ntBASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Timm23-208ENSMUST00000226683 750 ntBASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4-4-dv10A0A075B651 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.71□□□□□ -0.38
Trav4-4-dv10A0A075B651 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4-4-dv10A0A075B651 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Prob1-201ENSMUST00000097619 3021 ntBASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms