Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Gm13158-201ENSMUST00000122007 736 ntBASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav13-2A0A075B649 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-2A0A075B649 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Gm8495-201ENSMUST00000188740 694 ntBASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-2A0A075B649 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms