Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Gm42778-201ENSMUST00000199644 553 ntBASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav8-1A0A075B641 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav8-1A0A075B641 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav8-1A0A075B641 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms