Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gm18101-201ENSMUST00000215769 548 ntBASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-7-dv9A0A075B639 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gm6433-201ENSMUST00000118634 875 ntBASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Gm15565-201ENSMUST00000118890 427 ntBASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-7-dv9A0A075B639 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms