Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav7n-4A0A075B620 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 App-207ENSMUST00000227737 2827 ntBASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Mtag2-201ENSMUST00000058665 714 ntBASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Sybu-209ENSMUST00000228639 4113 ntBASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav7n-4A0A075B620 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav7n-4A0A075B620 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms