Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcf1Q9QZM3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clcf1Q9QZM3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.93■□□□□ 0.94
Clcf1Q9QZM3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcf1Q9QZM3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcf1Q9QZM3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcf1Q9QZM3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcf1Q9QZM3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.92■□□□□ 0.94
Clcf1Q9QZM3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcf1Q9QZM3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcf1Q9QZM3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcf1Q9QZM3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clcf1Q9QZM3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clcf1Q9QZM3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcf1Q9QZM3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Clcf1Q9QZM3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcf1Q9QZM3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcf1Q9QZM3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.88■□□□□ 0.93
Clcf1Q9QZM3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcf1Q9QZM3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcf1Q9QZM3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcf1Q9QZM3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcf1Q9QZM3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Clcf1Q9QZM3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clcf1Q9QZM3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcf1Q9QZM3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcf1Q9QZM3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcf1Q9QZM3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Clcf1Q9QZM3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.86■□□□□ 0.93
Clcf1Q9QZM3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcf1Q9QZM3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcf1Q9QZM3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcf1Q9QZM3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Clcf1Q9QZM3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcf1Q9QZM3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Clcf1Q9QZM3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcf1Q9QZM3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcf1Q9QZM3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcf1Q9QZM3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Clcf1Q9QZM3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clcf1Q9QZM3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.82■□□□□ 0.92
Clcf1Q9QZM3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcf1Q9QZM3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.81■□□□□ 0.92
Clcf1Q9QZM3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcf1Q9QZM3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcf1Q9QZM3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcf1Q9QZM3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Clcf1Q9QZM3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcf1Q9QZM3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Clcf1Q9QZM3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcf1Q9QZM3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Clcf1Q9QZM3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Clcf1Q9QZM3 Gm37136-201ENSMUST00000194368 194 ntBASIC20.8■□□□□ 0.92
Clcf1Q9QZM3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcf1Q9QZM3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clcf1Q9QZM3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clcf1Q9QZM3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcf1Q9QZM3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcf1Q9QZM3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Clcf1Q9QZM3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcf1Q9QZM3 Gm6311-201ENSMUST00000073790 878 ntBASIC20.78■□□□□ 0.92
Clcf1Q9QZM3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcf1Q9QZM3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcf1Q9QZM3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Clcf1Q9QZM3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.77■□□□□ 0.92
Clcf1Q9QZM3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Clcf1Q9QZM3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Clcf1Q9QZM3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.76■□□□□ 0.91
Clcf1Q9QZM3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcf1Q9QZM3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcf1Q9QZM3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcf1Q9QZM3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Clcf1Q9QZM3 Gm11175-201ENSMUST00000116172 543 ntBASIC20.74■□□□□ 0.91
Clcf1Q9QZM3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcf1Q9QZM3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcf1Q9QZM3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcf1Q9QZM3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clcf1Q9QZM3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.72■□□□□ 0.91
Clcf1Q9QZM3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.72■□□□□ 0.91
Clcf1Q9QZM3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Clcf1Q9QZM3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcf1Q9QZM3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcf1Q9QZM3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcf1Q9QZM3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcf1Q9QZM3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcf1Q9QZM3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcf1Q9QZM3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Clcf1Q9QZM3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcf1Q9QZM3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcf1Q9QZM3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcf1Q9QZM3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcf1Q9QZM3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcf1Q9QZM3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms