Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nrip3Q9JJR9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nrip3Q9JJR9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nrip3Q9JJR9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nrip3Q9JJR9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nrip3Q9JJR9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Nrip3Q9JJR9 Particl-201ENSMUST00000205370 1560 ntBASIC21■□□□□ 0.95
Nrip3Q9JJR9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nrip3Q9JJR9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nrip3Q9JJR9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.99■□□□□ 0.95
Nrip3Q9JJR9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nrip3Q9JJR9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Nrip3Q9JJR9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Nrip3Q9JJR9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nrip3Q9JJR9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nrip3Q9JJR9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nrip3Q9JJR9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.97■□□□□ 0.95
Nrip3Q9JJR9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nrip3Q9JJR9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nrip3Q9JJR9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Gm30023-201ENSMUST00000197970 889 ntBASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.96■□□□□ 0.95
Nrip3Q9JJR9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nrip3Q9JJR9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nrip3Q9JJR9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nrip3Q9JJR9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nrip3Q9JJR9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nrip3Q9JJR9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Nrip3Q9JJR9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nrip3Q9JJR9 Gm24970-201ENSMUST00000175582 82 ntBASIC20.91■□□□□ 0.94
Nrip3Q9JJR9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Nrip3Q9JJR9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nrip3Q9JJR9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nrip3Q9JJR9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nrip3Q9JJR9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nrip3Q9JJR9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nrip3Q9JJR9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nrip3Q9JJR9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nrip3Q9JJR9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.9■□□□□ 0.94
Nrip3Q9JJR9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nrip3Q9JJR9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nrip3Q9JJR9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nrip3Q9JJR9 Gm9397-201ENSMUST00000200125 605 ntBASIC20.89■□□□□ 0.93
Nrip3Q9JJR9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nrip3Q9JJR9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nrip3Q9JJR9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nrip3Q9JJR9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Nrip3Q9JJR9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Nrip3Q9JJR9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Nrip3Q9JJR9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nrip3Q9JJR9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nrip3Q9JJR9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nrip3Q9JJR9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nrip3Q9JJR9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.87■□□□□ 0.93
Nrip3Q9JJR9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nrip3Q9JJR9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nrip3Q9JJR9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nrip3Q9JJR9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.86■□□□□ 0.93
Nrip3Q9JJR9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nrip3Q9JJR9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nrip3Q9JJR9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nrip3Q9JJR9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.83■□□□□ 0.93
Nrip3Q9JJR9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Nrip3Q9JJR9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nrip3Q9JJR9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nrip3Q9JJR9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nrip3Q9JJR9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nrip3Q9JJR9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nrip3Q9JJR9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.81■□□□□ 0.92
Nrip3Q9JJR9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nrip3Q9JJR9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nrip3Q9JJR9 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.8■□□□□ 0.92
Nrip3Q9JJR9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.8■□□□□ 0.92
Nrip3Q9JJR9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nrip3Q9JJR9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nrip3Q9JJR9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nrip3Q9JJR9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nrip3Q9JJR9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Nrip3Q9JJR9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nrip3Q9JJR9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nrip3Q9JJR9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nrip3Q9JJR9 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.78■□□□□ 0.92
Nrip3Q9JJR9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nrip3Q9JJR9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nrip3Q9JJR9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Nrip3Q9JJR9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nrip3Q9JJR9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms