Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.22■□□□□ 0.67
Herpud1Q9JJK5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herpud1Q9JJK5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.21■□□□□ 0.67
Herpud1Q9JJK5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herpud1Q9JJK5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herpud1Q9JJK5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Herpud1Q9JJK5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Herpud1Q9JJK5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herpud1Q9JJK5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herpud1Q9JJK5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Herpud1Q9JJK5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Herpud1Q9JJK5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Herpud1Q9JJK5 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.17■□□□□ 0.66
Herpud1Q9JJK5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Herpud1Q9JJK5 Particl-201ENSMUST00000205370 1560 ntBASIC19.16■□□□□ 0.66
Herpud1Q9JJK5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herpud1Q9JJK5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Herpud1Q9JJK5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Herpud1Q9JJK5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Herpud1Q9JJK5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herpud1Q9JJK5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herpud1Q9JJK5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herpud1Q9JJK5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Herpud1Q9JJK5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herpud1Q9JJK5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Herpud1Q9JJK5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herpud1Q9JJK5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herpud1Q9JJK5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.14■□□□□ 0.65
Herpud1Q9JJK5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Herpud1Q9JJK5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Herpud1Q9JJK5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Herpud1Q9JJK5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Herpud1Q9JJK5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Herpud1Q9JJK5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Herpud1Q9JJK5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Herpud1Q9JJK5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Herpud1Q9JJK5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Herpud1Q9JJK5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Herpud1Q9JJK5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Herpud1Q9JJK5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.11■□□□□ 0.65
Herpud1Q9JJK5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Herpud1Q9JJK5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Herpud1Q9JJK5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Herpud1Q9JJK5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Herpud1Q9JJK5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Herpud1Q9JJK5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Herpud1Q9JJK5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Herpud1Q9JJK5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Herpud1Q9JJK5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Herpud1Q9JJK5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Herpud1Q9JJK5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Herpud1Q9JJK5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Herpud1Q9JJK5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Herpud1Q9JJK5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Herpud1Q9JJK5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.08■□□□□ 0.64
Herpud1Q9JJK5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Herpud1Q9JJK5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Herpud1Q9JJK5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Herpud1Q9JJK5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Herpud1Q9JJK5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Herpud1Q9JJK5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Herpud1Q9JJK5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Herpud1Q9JJK5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Herpud1Q9JJK5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Herpud1Q9JJK5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.06■□□□□ 0.64
Herpud1Q9JJK5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Herpud1Q9JJK5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Herpud1Q9JJK5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Herpud1Q9JJK5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Herpud1Q9JJK5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Herpud1Q9JJK5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Herpud1Q9JJK5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Herpud1Q9JJK5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Herpud1Q9JJK5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.04■□□□□ 0.64
Herpud1Q9JJK5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Herpud1Q9JJK5 Nkain2-201ENSMUST00000092602 558 ntBASIC19.04■□□□□ 0.64
Herpud1Q9JJK5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.04■□□□□ 0.64
Herpud1Q9JJK5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Herpud1Q9JJK5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Herpud1Q9JJK5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Herpud1Q9JJK5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Herpud1Q9JJK5 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.01■□□□□ 0.63
Herpud1Q9JJK5 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.01■□□□□ 0.63
Herpud1Q9JJK5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Herpud1Q9JJK5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms