Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Amer2-203ENSMUST00000225247 2662 ntBASIC24.46■■□□□ 1.51
NckipsdQ9ESJ4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NckipsdQ9ESJ4 Gm11687-201ENSMUST00000118911 886 ntBASIC24.46■■□□□ 1.51
NckipsdQ9ESJ4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.46■■□□□ 1.51
NckipsdQ9ESJ4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NckipsdQ9ESJ4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
NckipsdQ9ESJ4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
NckipsdQ9ESJ4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.44■■□□□ 1.5
NckipsdQ9ESJ4 Gm16437-201ENSMUST00000025669 507 ntBASIC24.44■■□□□ 1.5
NckipsdQ9ESJ4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NckipsdQ9ESJ4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NckipsdQ9ESJ4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.43■■□□□ 1.5
NckipsdQ9ESJ4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.43■■□□□ 1.5
NckipsdQ9ESJ4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
NckipsdQ9ESJ4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
NckipsdQ9ESJ4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
NckipsdQ9ESJ4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NckipsdQ9ESJ4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.42■■□□□ 1.5
NckipsdQ9ESJ4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NckipsdQ9ESJ4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.41■■□□□ 1.5
NckipsdQ9ESJ4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NckipsdQ9ESJ4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NckipsdQ9ESJ4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NckipsdQ9ESJ4 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.4■■□□□ 1.5
NckipsdQ9ESJ4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NckipsdQ9ESJ4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.4■■□□□ 1.5
NckipsdQ9ESJ4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NckipsdQ9ESJ4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NckipsdQ9ESJ4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NckipsdQ9ESJ4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NckipsdQ9ESJ4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NckipsdQ9ESJ4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NckipsdQ9ESJ4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
NckipsdQ9ESJ4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NckipsdQ9ESJ4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.36■■□□□ 1.49
NckipsdQ9ESJ4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.36■■□□□ 1.49
NckipsdQ9ESJ4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NckipsdQ9ESJ4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NckipsdQ9ESJ4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NckipsdQ9ESJ4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.34■■□□□ 1.49
NckipsdQ9ESJ4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NckipsdQ9ESJ4 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.33■■□□□ 1.49
NckipsdQ9ESJ4 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.33■■□□□ 1.49
NckipsdQ9ESJ4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NckipsdQ9ESJ4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NckipsdQ9ESJ4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.32■■□□□ 1.48
NckipsdQ9ESJ4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NckipsdQ9ESJ4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NckipsdQ9ESJ4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NckipsdQ9ESJ4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NckipsdQ9ESJ4 Gm9812-201ENSMUST00000061934 968 ntBASIC24.29■■□□□ 1.48
NckipsdQ9ESJ4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NckipsdQ9ESJ4 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.29■■□□□ 1.48
NckipsdQ9ESJ4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
NckipsdQ9ESJ4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NckipsdQ9ESJ4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NckipsdQ9ESJ4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NckipsdQ9ESJ4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Gm12366-201ENSMUST00000121722 873 ntBASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Gm5786-201ENSMUST00000085368 882 ntBASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NckipsdQ9ESJ4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
NckipsdQ9ESJ4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.26■■□□□ 1.47
NckipsdQ9ESJ4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NckipsdQ9ESJ4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NckipsdQ9ESJ4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
NckipsdQ9ESJ4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NckipsdQ9ESJ4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NckipsdQ9ESJ4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NckipsdQ9ESJ4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NckipsdQ9ESJ4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NckipsdQ9ESJ4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NckipsdQ9ESJ4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
NckipsdQ9ESJ4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.22■■□□□ 1.47
NckipsdQ9ESJ4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.22■■□□□ 1.47
NckipsdQ9ESJ4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NckipsdQ9ESJ4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NckipsdQ9ESJ4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NckipsdQ9ESJ4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NckipsdQ9ESJ4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NckipsdQ9ESJ4 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.2■■□□□ 1.47
NckipsdQ9ESJ4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
NckipsdQ9ESJ4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
NckipsdQ9ESJ4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NckipsdQ9ESJ4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.2■■□□□ 1.46
NckipsdQ9ESJ4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NckipsdQ9ESJ4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NckipsdQ9ESJ4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
NckipsdQ9ESJ4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
NckipsdQ9ESJ4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
NckipsdQ9ESJ4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NckipsdQ9ESJ4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
NckipsdQ9ESJ4 Gm27502-201ENSMUST00000183495 199 ntBASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms