Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgn3Q9DCB1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgn3Q9DCB1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Hmgn3Q9DCB1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.87■■□□□ 1.09
Hmgn3Q9DCB1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.87■■□□□ 1.09
Hmgn3Q9DCB1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgn3Q9DCB1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.85■■□□□ 1.09
Hmgn3Q9DCB1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgn3Q9DCB1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgn3Q9DCB1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn3Q9DCB1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn3Q9DCB1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgn3Q9DCB1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgn3Q9DCB1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgn3Q9DCB1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgn3Q9DCB1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Hmgn3Q9DCB1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Hmgn3Q9DCB1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgn3Q9DCB1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Hmgn3Q9DCB1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Hmgn3Q9DCB1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.7■■□□□ 1.06
Hmgn3Q9DCB1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Gm24804-201ENSMUST00000174982 85 ntBASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgn3Q9DCB1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.66■■□□□ 1.06
Hmgn3Q9DCB1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgn3Q9DCB1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms