Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhac2Q91Y09 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhac2Q91Y09 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhac2Q91Y09 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhac2Q91Y09 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
Pcdhac2Q91Y09 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhac2Q91Y09 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.82■■□□□ 1.72
Pcdhac2Q91Y09 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhac2Q91Y09 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhac2Q91Y09 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhac2Q91Y09 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhac2Q91Y09 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
Pcdhac2Q91Y09 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.79■■□□□ 1.72
Pcdhac2Q91Y09 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdhac2Q91Y09 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhac2Q91Y09 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.78■■□□□ 1.72
Pcdhac2Q91Y09 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhac2Q91Y09 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhac2Q91Y09 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.77■■□□□ 1.72
Pcdhac2Q91Y09 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Pcdhac2Q91Y09 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhac2Q91Y09 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhac2Q91Y09 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhac2Q91Y09 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.76■■□□□ 1.71
Pcdhac2Q91Y09 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhac2Q91Y09 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhac2Q91Y09 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
Pcdhac2Q91Y09 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.75■■□□□ 1.71
Pcdhac2Q91Y09 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhac2Q91Y09 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhac2Q91Y09 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhac2Q91Y09 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhac2Q91Y09 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
Pcdhac2Q91Y09 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.73■■□□□ 1.71
Pcdhac2Q91Y09 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhac2Q91Y09 Gm7332-201ENSMUST00000118351 454 ntBASIC25.71■■□□□ 1.71
Pcdhac2Q91Y09 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.71■■□□□ 1.71
Pcdhac2Q91Y09 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhac2Q91Y09 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.7■■□□□ 1.7
Pcdhac2Q91Y09 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.7■■□□□ 1.7
Pcdhac2Q91Y09 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhac2Q91Y09 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhac2Q91Y09 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhac2Q91Y09 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Pcdhac2Q91Y09 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.69■■□□□ 1.7
Pcdhac2Q91Y09 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhac2Q91Y09 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhac2Q91Y09 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhac2Q91Y09 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhac2Q91Y09 Amer2-203ENSMUST00000225247 2662 ntBASIC25.68■■□□□ 1.7
Pcdhac2Q91Y09 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhac2Q91Y09 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhac2Q91Y09 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhac2Q91Y09 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhac2Q91Y09 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhac2Q91Y09 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhac2Q91Y09 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhac2Q91Y09 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhac2Q91Y09 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhac2Q91Y09 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Pcdhac2Q91Y09 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhac2Q91Y09 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.63■■□□□ 1.69
Pcdhac2Q91Y09 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhac2Q91Y09 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhac2Q91Y09 Gm14523-201ENSMUST00000117260 558 ntBASIC25.62■■□□□ 1.69
Pcdhac2Q91Y09 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhac2Q91Y09 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Pcdhac2Q91Y09 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhac2Q91Y09 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhac2Q91Y09 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhac2Q91Y09 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhac2Q91Y09 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Pcdhac2Q91Y09 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.59■■□□□ 1.69
Pcdhac2Q91Y09 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhac2Q91Y09 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhac2Q91Y09 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.58■■□□□ 1.69
Pcdhac2Q91Y09 Gm9812-201ENSMUST00000061934 968 ntBASIC25.58■■□□□ 1.69
Pcdhac2Q91Y09 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.58■■□□□ 1.69
Pcdhac2Q91Y09 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhac2Q91Y09 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.57■■□□□ 1.68
Pcdhac2Q91Y09 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhac2Q91Y09 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.56■■□□□ 1.68
Pcdhac2Q91Y09 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhac2Q91Y09 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhac2Q91Y09 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhac2Q91Y09 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhac2Q91Y09 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhac2Q91Y09 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.54■■□□□ 1.68
Pcdhac2Q91Y09 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhac2Q91Y09 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Pcdhac2Q91Y09 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhac2Q91Y09 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhac2Q91Y09 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhac2Q91Y09 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Pcdhac2Q91Y09 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhac2Q91Y09 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.52■■□□□ 1.68
Pcdhac2Q91Y09 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhac2Q91Y09 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhac2Q91Y09 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhac2Q91Y09 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms