Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgc3Q91XX1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhgc3Q91XX1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdhgc3Q91XX1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgc3Q91XX1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgc3Q91XX1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgc3Q91XX1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhgc3Q91XX1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhgc3Q91XX1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdhgc3Q91XX1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhgc3Q91XX1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhgc3Q91XX1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcdhgc3Q91XX1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgc3Q91XX1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhgc3Q91XX1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgc3Q91XX1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhgc3Q91XX1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhgc3Q91XX1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Pcdhgc3Q91XX1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgc3Q91XX1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgc3Q91XX1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgc3Q91XX1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgc3Q91XX1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgc3Q91XX1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhgc3Q91XX1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhgc3Q91XX1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgc3Q91XX1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgc3Q91XX1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgc3Q91XX1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgc3Q91XX1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgc3Q91XX1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhgc3Q91XX1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgc3Q91XX1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhgc3Q91XX1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhgc3Q91XX1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhgc3Q91XX1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Pcdhgc3Q91XX1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgc3Q91XX1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgc3Q91XX1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhgc3Q91XX1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgc3Q91XX1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgc3Q91XX1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhgc3Q91XX1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcdhgc3Q91XX1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgc3Q91XX1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgc3Q91XX1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgc3Q91XX1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgc3Q91XX1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhgc3Q91XX1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgc3Q91XX1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgc3Q91XX1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgc3Q91XX1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.79■■□□□ 1.08
Pcdhgc3Q91XX1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhgc3Q91XX1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhgc3Q91XX1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhgc3Q91XX1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pcdhgc3Q91XX1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhgc3Q91XX1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhgc3Q91XX1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhgc3Q91XX1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc3Q91XX1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc3Q91XX1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc3Q91XX1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc3Q91XX1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc3Q91XX1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc3Q91XX1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgc3Q91XX1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.75■■□□□ 1.07
Pcdhgc3Q91XX1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc3Q91XX1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc3Q91XX1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc3Q91XX1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc3Q91XX1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgc3Q91XX1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgc3Q91XX1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.73■■□□□ 1.07
Pcdhgc3Q91XX1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc3Q91XX1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc3Q91XX1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc3Q91XX1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc3Q91XX1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgc3Q91XX1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc3Q91XX1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc3Q91XX1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhgc3Q91XX1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgc3Q91XX1 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.71■■□□□ 1.07
Pcdhgc3Q91XX1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhgc3Q91XX1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdhgc3Q91XX1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pcdhgc3Q91XX1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgc3Q91XX1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhgc3Q91XX1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgc3Q91XX1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms