Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.18■■□□□ 1.94
Trex1Q91XB0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trex1Q91XB0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.17■■□□□ 1.94
Trex1Q91XB0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trex1Q91XB0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.16■■□□□ 1.94
Trex1Q91XB0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.16■■□□□ 1.94
Trex1Q91XB0 Gm12366-201ENSMUST00000121722 873 ntBASIC27.16■■□□□ 1.94
Trex1Q91XB0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.16■■□□□ 1.94
Trex1Q91XB0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.16■■□□□ 1.94
Trex1Q91XB0 Gm5786-201ENSMUST00000085368 882 ntBASIC27.16■■□□□ 1.94
Trex1Q91XB0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trex1Q91XB0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trex1Q91XB0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.14■■□□□ 1.94
Trex1Q91XB0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.14■■□□□ 1.94
Trex1Q91XB0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.14■■□□□ 1.94
Trex1Q91XB0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trex1Q91XB0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Trex1Q91XB0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Trex1Q91XB0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Trex1Q91XB0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trex1Q91XB0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Trex1Q91XB0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trex1Q91XB0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.12■■□□□ 1.93
Trex1Q91XB0 Amer2-203ENSMUST00000225247 2662 ntBASIC27.12■■□□□ 1.93
Trex1Q91XB0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trex1Q91XB0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Trex1Q91XB0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trex1Q91XB0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trex1Q91XB0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Trex1Q91XB0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Trex1Q91XB0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Trex1Q91XB0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Trex1Q91XB0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trex1Q91XB0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Trex1Q91XB0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Trex1Q91XB0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Trex1Q91XB0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.08■■□□□ 1.93
Trex1Q91XB0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Trex1Q91XB0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trex1Q91XB0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Trex1Q91XB0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Trex1Q91XB0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trex1Q91XB0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Trex1Q91XB0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.06■■□□□ 1.92
Trex1Q91XB0 Gm27502-201ENSMUST00000183495 199 ntBASIC27.06■■□□□ 1.92
Trex1Q91XB0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trex1Q91XB0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trex1Q91XB0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.05■■□□□ 1.92
Trex1Q91XB0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.05■■□□□ 1.92
Trex1Q91XB0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Trex1Q91XB0 Gm9812-201ENSMUST00000061934 968 ntBASIC27.04■■□□□ 1.92
Trex1Q91XB0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trex1Q91XB0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trex1Q91XB0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trex1Q91XB0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.03■■□□□ 1.92
Trex1Q91XB0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trex1Q91XB0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.02■■□□□ 1.92
Trex1Q91XB0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trex1Q91XB0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trex1Q91XB0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trex1Q91XB0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trex1Q91XB0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Trex1Q91XB0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Trex1Q91XB0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27■■□□□ 1.91
Trex1Q91XB0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Trex1Q91XB0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trex1Q91XB0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trex1Q91XB0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trex1Q91XB0 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.99■■□□□ 1.91
Trex1Q91XB0 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.99■■□□□ 1.91
Trex1Q91XB0 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.99■■□□□ 1.91
Trex1Q91XB0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Trex1Q91XB0 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.98■■□□□ 1.91
Trex1Q91XB0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trex1Q91XB0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trex1Q91XB0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trex1Q91XB0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Trex1Q91XB0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.97■■□□□ 1.91
Trex1Q91XB0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Trex1Q91XB0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trex1Q91XB0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trex1Q91XB0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trex1Q91XB0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Trex1Q91XB0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Trex1Q91XB0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trex1Q91XB0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.94■■□□□ 1.9
Trex1Q91XB0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Trex1Q91XB0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trex1Q91XB0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
Trex1Q91XB0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trex1Q91XB0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trex1Q91XB0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Trex1Q91XB0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.93■■□□□ 1.9
Trex1Q91XB0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Trex1Q91XB0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trex1Q91XB0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trex1Q91XB0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trex1Q91XB0 Gm7332-201ENSMUST00000118351 454 ntBASIC26.91■■□□□ 1.9
Trex1Q91XB0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.91■■□□□ 1.9
Trex1Q91XB0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms