Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Chmp7Q8R1T1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Chmp7Q8R1T1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.31■■■□□ 2.44
Chmp7Q8R1T1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Chmp7Q8R1T1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Chmp7Q8R1T1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Chmp7Q8R1T1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Chmp7Q8R1T1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Chmp7Q8R1T1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Chmp7Q8R1T1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.29■■■□□ 2.44
Chmp7Q8R1T1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30.28■■■□□ 2.44
Chmp7Q8R1T1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.28■■■□□ 2.44
Chmp7Q8R1T1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Chmp7Q8R1T1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Chmp7Q8R1T1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Chmp7Q8R1T1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Chmp7Q8R1T1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Chmp7Q8R1T1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Chmp7Q8R1T1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Chmp7Q8R1T1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Chmp7Q8R1T1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
Chmp7Q8R1T1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Chmp7Q8R1T1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Chmp7Q8R1T1 Gm27502-201ENSMUST00000183495 199 ntBASIC30.23■■■□□ 2.43
Chmp7Q8R1T1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC30.22■■■□□ 2.43
Chmp7Q8R1T1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.22■■■□□ 2.43
Chmp7Q8R1T1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Chmp7Q8R1T1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Chmp7Q8R1T1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Chmp7Q8R1T1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Chmp7Q8R1T1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.18■■■□□ 2.42
Chmp7Q8R1T1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Chmp7Q8R1T1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30.17■■■□□ 2.42
Chmp7Q8R1T1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.17■■■□□ 2.42
Chmp7Q8R1T1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Chmp7Q8R1T1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Chmp7Q8R1T1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Chmp7Q8R1T1 Gm9812-201ENSMUST00000061934 968 ntBASIC30.16■■■□□ 2.42
Chmp7Q8R1T1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC30.16■■■□□ 2.42
Chmp7Q8R1T1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Chmp7Q8R1T1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Chmp7Q8R1T1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
Chmp7Q8R1T1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Chmp7Q8R1T1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Chmp7Q8R1T1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Chmp7Q8R1T1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Chmp7Q8R1T1 Gm7332-201ENSMUST00000118351 454 ntBASIC30.14■■■□□ 2.42
Chmp7Q8R1T1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC30.14■■■□□ 2.42
Chmp7Q8R1T1 Gm9910-201ENSMUST00000195385 1550 ntBASIC30.14■■■□□ 2.42
Chmp7Q8R1T1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
Chmp7Q8R1T1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Chmp7Q8R1T1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Chmp7Q8R1T1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Chmp7Q8R1T1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Chmp7Q8R1T1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Chmp7Q8R1T1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Chmp7Q8R1T1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Chmp7Q8R1T1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Chmp7Q8R1T1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Chmp7Q8R1T1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Chmp7Q8R1T1 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.1■■■□□ 2.41
Chmp7Q8R1T1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Chmp7Q8R1T1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Chmp7Q8R1T1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
Chmp7Q8R1T1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Chmp7Q8R1T1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Chmp7Q8R1T1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Chmp7Q8R1T1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Chmp7Q8R1T1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Chmp7Q8R1T1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Chmp7Q8R1T1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Chmp7Q8R1T1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC30.07■■■□□ 2.4
Chmp7Q8R1T1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Chmp7Q8R1T1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Chmp7Q8R1T1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Chmp7Q8R1T1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Chmp7Q8R1T1 Gm14523-201ENSMUST00000117260 558 ntBASIC30.05■■■□□ 2.4
Chmp7Q8R1T1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Chmp7Q8R1T1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Chmp7Q8R1T1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Chmp7Q8R1T1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Chmp7Q8R1T1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Chmp7Q8R1T1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Chmp7Q8R1T1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
Chmp7Q8R1T1 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.01■■■□□ 2.4
Chmp7Q8R1T1 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.01■■■□□ 2.4
Chmp7Q8R1T1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.01■■■□□ 2.39
Chmp7Q8R1T1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Chmp7Q8R1T1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Chmp7Q8R1T1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Chmp7Q8R1T1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Chmp7Q8R1T1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Chmp7Q8R1T1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC29.99■■■□□ 2.39
Chmp7Q8R1T1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Chmp7Q8R1T1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Chmp7Q8R1T1 Gm14121-201ENSMUST00000121441 1380 ntBASIC29.98■■■□□ 2.39
Chmp7Q8R1T1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Chmp7Q8R1T1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Chmp7Q8R1T1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Chmp7Q8R1T1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms