Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zcchc9Q8R1J3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.2■■□□□ 1.3
Zcchc9Q8R1J3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Zcchc9Q8R1J3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Zcchc9Q8R1J3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Zcchc9Q8R1J3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Zcchc9Q8R1J3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Zcchc9Q8R1J3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Zcchc9Q8R1J3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.17■■□□□ 1.3
Zcchc9Q8R1J3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.17■■□□□ 1.3
Zcchc9Q8R1J3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.17■■□□□ 1.3
Zcchc9Q8R1J3 Gm4799-201ENSMUST00000095396 657 ntBASIC23.17■■□□□ 1.3
Zcchc9Q8R1J3 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.16■■□□□ 1.3
Zcchc9Q8R1J3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Zcchc9Q8R1J3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Zcchc9Q8R1J3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Zcchc9Q8R1J3 Gm16437-201ENSMUST00000025669 507 ntBASIC23.15■■□□□ 1.3
Zcchc9Q8R1J3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Zcchc9Q8R1J3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Zcchc9Q8R1J3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Zcchc9Q8R1J3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.13■■□□□ 1.29
Zcchc9Q8R1J3 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.13■■□□□ 1.29
Zcchc9Q8R1J3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Zcchc9Q8R1J3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.12■■□□□ 1.29
Zcchc9Q8R1J3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Zcchc9Q8R1J3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Zcchc9Q8R1J3 Mir3960-201ENSMUST00000198213 73 ntBASIC23.11■■□□□ 1.29
Zcchc9Q8R1J3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Zcchc9Q8R1J3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.1■■□□□ 1.29
Zcchc9Q8R1J3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Gm12366-201ENSMUST00000121722 873 ntBASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Gm5786-201ENSMUST00000085368 882 ntBASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Zcchc9Q8R1J3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Zcchc9Q8R1J3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Zcchc9Q8R1J3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Zcchc9Q8R1J3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Zcchc9Q8R1J3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Zcchc9Q8R1J3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Zcchc9Q8R1J3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Zcchc9Q8R1J3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Zcchc9Q8R1J3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.07■■□□□ 1.28
Zcchc9Q8R1J3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Zcchc9Q8R1J3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Zcchc9Q8R1J3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Zcchc9Q8R1J3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Zcchc9Q8R1J3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Zcchc9Q8R1J3 Gm45364-201ENSMUST00000210883 159 ntBASIC23.06■■□□□ 1.28
Zcchc9Q8R1J3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Zcchc9Q8R1J3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Zcchc9Q8R1J3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.05■■□□□ 1.28
Zcchc9Q8R1J3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zcchc9Q8R1J3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Zcchc9Q8R1J3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zcchc9Q8R1J3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zcchc9Q8R1J3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Zcchc9Q8R1J3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Zcchc9Q8R1J3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.03■■□□□ 1.28
Zcchc9Q8R1J3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Zcchc9Q8R1J3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Zcchc9Q8R1J3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Zcchc9Q8R1J3 Gm37136-201ENSMUST00000194368 194 ntBASIC23.01■■□□□ 1.27
Zcchc9Q8R1J3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.01■■□□□ 1.27
Zcchc9Q8R1J3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Zcchc9Q8R1J3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Zcchc9Q8R1J3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zcchc9Q8R1J3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23■■□□□ 1.27
Zcchc9Q8R1J3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23■■□□□ 1.27
Zcchc9Q8R1J3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zcchc9Q8R1J3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Zcchc9Q8R1J3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Zcchc9Q8R1J3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Zcchc9Q8R1J3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Zcchc9Q8R1J3 Gm27502-201ENSMUST00000183495 199 ntBASIC22.99■■□□□ 1.27
Zcchc9Q8R1J3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Zcchc9Q8R1J3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Zcchc9Q8R1J3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Zcchc9Q8R1J3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Zcchc9Q8R1J3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Zcchc9Q8R1J3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Zcchc9Q8R1J3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Zcchc9Q8R1J3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Zcchc9Q8R1J3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Zcchc9Q8R1J3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Zcchc9Q8R1J3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Zcchc9Q8R1J3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.96■■□□□ 1.27
Zcchc9Q8R1J3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Zcchc9Q8R1J3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Zcchc9Q8R1J3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Zcchc9Q8R1J3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Zcchc9Q8R1J3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Zcchc9Q8R1J3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Zcchc9Q8R1J3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Zcchc9Q8R1J3 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms