Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rtp1Q8C8C1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.22■■□□□ 1.95
Rtp1Q8C8C1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Rtp1Q8C8C1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rtp1Q8C8C1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rtp1Q8C8C1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rtp1Q8C8C1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.2■■□□□ 1.95
Rtp1Q8C8C1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rtp1Q8C8C1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Rtp1Q8C8C1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Rtp1Q8C8C1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Rtp1Q8C8C1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.19■■□□□ 1.94
Rtp1Q8C8C1 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Gm5921-201ENSMUST00000075898 882 ntBASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.18■■□□□ 1.94
Rtp1Q8C8C1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.15■■□□□ 1.94
Rtp1Q8C8C1 Gm37136-201ENSMUST00000194368 194 ntBASIC27.15■■□□□ 1.94
Rtp1Q8C8C1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtp1Q8C8C1 Gm10420-201ENSMUST00000121713 882 ntBASIC27.14■■□□□ 1.94
Rtp1Q8C8C1 Gm15546-201ENSMUST00000122095 826 ntBASIC27.14■■□□□ 1.94
Rtp1Q8C8C1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rtp1Q8C8C1 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtp1Q8C8C1 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.12■■□□□ 1.93
Rtp1Q8C8C1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rtp1Q8C8C1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rtp1Q8C8C1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rtp1Q8C8C1 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.11■■□□□ 1.93
Rtp1Q8C8C1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.11■■□□□ 1.93
Rtp1Q8C8C1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rtp1Q8C8C1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rtp1Q8C8C1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rtp1Q8C8C1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rtp1Q8C8C1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.09■■□□□ 1.93
Rtp1Q8C8C1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Rtp1Q8C8C1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rtp1Q8C8C1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rtp1Q8C8C1 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.08■■□□□ 1.93
Rtp1Q8C8C1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.08■■□□□ 1.93
Rtp1Q8C8C1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.08■■□□□ 1.93
Rtp1Q8C8C1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.07■■□□□ 1.92
Rtp1Q8C8C1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.07■■□□□ 1.92
Rtp1Q8C8C1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rtp1Q8C8C1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rtp1Q8C8C1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Rtp1Q8C8C1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.05■■□□□ 1.92
Rtp1Q8C8C1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Rtp1Q8C8C1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rtp1Q8C8C1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rtp1Q8C8C1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Rtp1Q8C8C1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rtp1Q8C8C1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rtp1Q8C8C1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC27.04■■□□□ 1.92
Rtp1Q8C8C1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rtp1Q8C8C1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rtp1Q8C8C1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rtp1Q8C8C1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rtp1Q8C8C1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rtp1Q8C8C1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rtp1Q8C8C1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rtp1Q8C8C1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Rtp1Q8C8C1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27■■□□□ 1.91
Rtp1Q8C8C1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rtp1Q8C8C1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rtp1Q8C8C1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Rtp1Q8C8C1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rtp1Q8C8C1 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.98■■□□□ 1.91
Rtp1Q8C8C1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rtp1Q8C8C1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.97■■□□□ 1.91
Rtp1Q8C8C1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rtp1Q8C8C1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rtp1Q8C8C1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Rtp1Q8C8C1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rtp1Q8C8C1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rtp1Q8C8C1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Rtp1Q8C8C1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Rtp1Q8C8C1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Rtp1Q8C8C1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.95■■□□□ 1.9
Rtp1Q8C8C1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.95■■□□□ 1.9
Rtp1Q8C8C1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Rtp1Q8C8C1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtp1Q8C8C1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtp1Q8C8C1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.94■■□□□ 1.9
Rtp1Q8C8C1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rtp1Q8C8C1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.93■■□□□ 1.9
Rtp1Q8C8C1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rtp1Q8C8C1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.93■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms