Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Alx1Q8C8B0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Alx1Q8C8B0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.55■■■□□ 2
Alx1Q8C8B0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
Alx1Q8C8B0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.55■■■□□ 2
Alx1Q8C8B0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
Alx1Q8C8B0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.54■■■□□ 2
Alx1Q8C8B0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.54■■■□□ 2
Alx1Q8C8B0 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.54■■■□□ 2
Alx1Q8C8B0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
Alx1Q8C8B0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Alx1Q8C8B0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Alx1Q8C8B0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Alx1Q8C8B0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Alx1Q8C8B0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Alx1Q8C8B0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.51■■□□□ 1.99
Alx1Q8C8B0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.5■■□□□ 1.99
Alx1Q8C8B0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Alx1Q8C8B0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Alx1Q8C8B0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.5■■□□□ 1.99
Alx1Q8C8B0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Alx1Q8C8B0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Alx1Q8C8B0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Alx1Q8C8B0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Alx1Q8C8B0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Alx1Q8C8B0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
Alx1Q8C8B0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.47■■□□□ 1.99
Alx1Q8C8B0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.47■■□□□ 1.99
Alx1Q8C8B0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Alx1Q8C8B0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Alx1Q8C8B0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Alx1Q8C8B0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.44■■□□□ 1.98
Alx1Q8C8B0 Gm4799-201ENSMUST00000095396 657 ntBASIC27.44■■□□□ 1.98
Alx1Q8C8B0 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.44■■□□□ 1.98
Alx1Q8C8B0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Alx1Q8C8B0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Alx1Q8C8B0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Alx1Q8C8B0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Alx1Q8C8B0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Alx1Q8C8B0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Alx1Q8C8B0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Alx1Q8C8B0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Alx1Q8C8B0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Alx1Q8C8B0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Alx1Q8C8B0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Alx1Q8C8B0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Alx1Q8C8B0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
Alx1Q8C8B0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
Alx1Q8C8B0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Alx1Q8C8B0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Alx1Q8C8B0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Alx1Q8C8B0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.38■■□□□ 1.97
Alx1Q8C8B0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Alx1Q8C8B0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.38■■□□□ 1.97
Alx1Q8C8B0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC27.38■■□□□ 1.97
Alx1Q8C8B0 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.37■■□□□ 1.97
Alx1Q8C8B0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Alx1Q8C8B0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Alx1Q8C8B0 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.36■■□□□ 1.97
Alx1Q8C8B0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Alx1Q8C8B0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Alx1Q8C8B0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.35■■□□□ 1.97
Alx1Q8C8B0 Mir3960-201ENSMUST00000198213 73 ntBASIC27.35■■□□□ 1.97
Alx1Q8C8B0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Alx1Q8C8B0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Alx1Q8C8B0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.34■■□□□ 1.97
Alx1Q8C8B0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Alx1Q8C8B0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Alx1Q8C8B0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Alx1Q8C8B0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Alx1Q8C8B0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Alx1Q8C8B0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Alx1Q8C8B0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Alx1Q8C8B0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.33■■□□□ 1.96
Alx1Q8C8B0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.32■■□□□ 1.96
Alx1Q8C8B0 Gm45364-201ENSMUST00000210883 159 ntBASIC27.32■■□□□ 1.96
Alx1Q8C8B0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
Alx1Q8C8B0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Alx1Q8C8B0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Alx1Q8C8B0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Alx1Q8C8B0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.3■■□□□ 1.96
Alx1Q8C8B0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.3■■□□□ 1.96
Alx1Q8C8B0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Alx1Q8C8B0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Alx1Q8C8B0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Alx1Q8C8B0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Alx1Q8C8B0 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.29■■□□□ 1.96
Alx1Q8C8B0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Alx1Q8C8B0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Alx1Q8C8B0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.28■■□□□ 1.96
Alx1Q8C8B0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Alx1Q8C8B0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.28■■□□□ 1.96
Alx1Q8C8B0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Alx1Q8C8B0 Gm9812-201ENSMUST00000061934 968 ntBASIC27.28■■□□□ 1.96
Alx1Q8C8B0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.27■■□□□ 1.96
Alx1Q8C8B0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Alx1Q8C8B0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Alx1Q8C8B0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Alx1Q8C8B0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Alx1Q8C8B0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms