Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps9d1Q8C190 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps9d1Q8C190 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Vps9d1Q8C190 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Vps9d1Q8C190 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.6■■□□□ 1.05
Vps9d1Q8C190 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps9d1Q8C190 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.59■■□□□ 1.05
Vps9d1Q8C190 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps9d1Q8C190 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps9d1Q8C190 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps9d1Q8C190 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps9d1Q8C190 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps9d1Q8C190 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps9d1Q8C190 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps9d1Q8C190 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps9d1Q8C190 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps9d1Q8C190 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps9d1Q8C190 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps9d1Q8C190 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.57■■□□□ 1.04
Vps9d1Q8C190 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps9d1Q8C190 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps9d1Q8C190 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Vps9d1Q8C190 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps9d1Q8C190 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps9d1Q8C190 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps9d1Q8C190 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Vps9d1Q8C190 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps9d1Q8C190 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps9d1Q8C190 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps9d1Q8C190 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps9d1Q8C190 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps9d1Q8C190 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps9d1Q8C190 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps9d1Q8C190 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps9d1Q8C190 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Vps9d1Q8C190 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps9d1Q8C190 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps9d1Q8C190 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Vps9d1Q8C190 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps9d1Q8C190 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps9d1Q8C190 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Vps9d1Q8C190 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps9d1Q8C190 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps9d1Q8C190 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps9d1Q8C190 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vps9d1Q8C190 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps9d1Q8C190 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps9d1Q8C190 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps9d1Q8C190 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps9d1Q8C190 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps9d1Q8C190 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Vps9d1Q8C190 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.49■■□□□ 1.03
Vps9d1Q8C190 Gm30023-201ENSMUST00000197970 889 ntBASIC21.49■■□□□ 1.03
Vps9d1Q8C190 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps9d1Q8C190 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps9d1Q8C190 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps9d1Q8C190 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.47■■□□□ 1.03
Vps9d1Q8C190 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.47■■□□□ 1.03
Vps9d1Q8C190 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.47■■□□□ 1.03
Vps9d1Q8C190 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.47■■□□□ 1.03
Vps9d1Q8C190 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps9d1Q8C190 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.45■■□□□ 1.02
Vps9d1Q8C190 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps9d1Q8C190 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps9d1Q8C190 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps9d1Q8C190 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps9d1Q8C190 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.45■■□□□ 1.02
Vps9d1Q8C190 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps9d1Q8C190 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps9d1Q8C190 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Vps9d1Q8C190 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Vps9d1Q8C190 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vps9d1Q8C190 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Vps9d1Q8C190 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps9d1Q8C190 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps9d1Q8C190 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Vps9d1Q8C190 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps9d1Q8C190 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps9d1Q8C190 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps9d1Q8C190 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps9d1Q8C190 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps9d1Q8C190 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps9d1Q8C190 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps9d1Q8C190 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps9d1Q8C190 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps9d1Q8C190 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps9d1Q8C190 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps9d1Q8C190 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps9d1Q8C190 Particl-201ENSMUST00000205370 1560 ntBASIC21.37■■□□□ 1.01
Vps9d1Q8C190 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps9d1Q8C190 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.35■■□□□ 1.01
Vps9d1Q8C190 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms