Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Snx17Q8BVL3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Snx17Q8BVL3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Snx17Q8BVL3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Snx17Q8BVL3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Snx17Q8BVL3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Snx17Q8BVL3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Snx17Q8BVL3 Gm5921-201ENSMUST00000075898 882 ntBASIC26.37■■□□□ 1.81
Snx17Q8BVL3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.37■■□□□ 1.81
Snx17Q8BVL3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Snx17Q8BVL3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Snx17Q8BVL3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Snx17Q8BVL3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Snx17Q8BVL3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Snx17Q8BVL3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.36■■□□□ 1.81
Snx17Q8BVL3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Snx17Q8BVL3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Snx17Q8BVL3 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.35■■□□□ 1.81
Snx17Q8BVL3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.35■■□□□ 1.81
Snx17Q8BVL3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Snx17Q8BVL3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Snx17Q8BVL3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Snx17Q8BVL3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Snx17Q8BVL3 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.34■■□□□ 1.81
Snx17Q8BVL3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Snx17Q8BVL3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.33■■□□□ 1.81
Snx17Q8BVL3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Snx17Q8BVL3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Snx17Q8BVL3 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.33■■□□□ 1.8
Snx17Q8BVL3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Snx17Q8BVL3 Gm10420-201ENSMUST00000121713 882 ntBASIC26.32■■□□□ 1.8
Snx17Q8BVL3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.32■■□□□ 1.8
Snx17Q8BVL3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Snx17Q8BVL3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.3■■□□□ 1.8
Snx17Q8BVL3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Snx17Q8BVL3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Snx17Q8BVL3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.29■■□□□ 1.8
Snx17Q8BVL3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.29■■□□□ 1.8
Snx17Q8BVL3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.29■■□□□ 1.8
Snx17Q8BVL3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.28■■□□□ 1.8
Snx17Q8BVL3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Snx17Q8BVL3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Snx17Q8BVL3 Gm9812-201ENSMUST00000061934 968 ntBASIC26.28■■□□□ 1.8
Snx17Q8BVL3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Snx17Q8BVL3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Snx17Q8BVL3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Snx17Q8BVL3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.26■■□□□ 1.79
Snx17Q8BVL3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Snx17Q8BVL3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Snx17Q8BVL3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.26■■□□□ 1.79
Snx17Q8BVL3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.26■■□□□ 1.79
Snx17Q8BVL3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Snx17Q8BVL3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.25■■□□□ 1.79
Snx17Q8BVL3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Snx17Q8BVL3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Snx17Q8BVL3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Snx17Q8BVL3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.23■■□□□ 1.79
Snx17Q8BVL3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.23■■□□□ 1.79
Snx17Q8BVL3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Snx17Q8BVL3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Snx17Q8BVL3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Snx17Q8BVL3 Gm15546-201ENSMUST00000122095 826 ntBASIC26.22■■□□□ 1.79
Snx17Q8BVL3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Snx17Q8BVL3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Snx17Q8BVL3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Snx17Q8BVL3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Snx17Q8BVL3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
Snx17Q8BVL3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Snx17Q8BVL3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Snx17Q8BVL3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Snx17Q8BVL3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Snx17Q8BVL3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.17■■□□□ 1.78
Snx17Q8BVL3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Snx17Q8BVL3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Snx17Q8BVL3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Snx17Q8BVL3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Snx17Q8BVL3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Snx17Q8BVL3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Snx17Q8BVL3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.14■■□□□ 1.78
Snx17Q8BVL3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Snx17Q8BVL3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.14■■□□□ 1.77
Snx17Q8BVL3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Snx17Q8BVL3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Snx17Q8BVL3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Snx17Q8BVL3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.12■■□□□ 1.77
Snx17Q8BVL3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Snx17Q8BVL3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Snx17Q8BVL3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Snx17Q8BVL3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Snx17Q8BVL3 Zxda-201ENSMUST00000117281 2621 ntBASIC26.11■■□□□ 1.77
Snx17Q8BVL3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Snx17Q8BVL3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Snx17Q8BVL3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Snx17Q8BVL3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Snx17Q8BVL3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Snx17Q8BVL3 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.1■■□□□ 1.77
Snx17Q8BVL3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Snx17Q8BVL3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.09■■□□□ 1.77
Snx17Q8BVL3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Snx17Q8BVL3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 1576.2 ms