Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdhr3Q8BL00 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdhr3Q8BL00 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.3■□□□□ 0.84
Cdhr3Q8BL00 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdhr3Q8BL00 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdhr3Q8BL00 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.28■□□□□ 0.84
Cdhr3Q8BL00 Particl-201ENSMUST00000205370 1560 ntBASIC20.28■□□□□ 0.84
Cdhr3Q8BL00 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdhr3Q8BL00 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdhr3Q8BL00 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdhr3Q8BL00 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cdhr3Q8BL00 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr3Q8BL00 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr3Q8BL00 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdhr3Q8BL00 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdhr3Q8BL00 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cdhr3Q8BL00 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdhr3Q8BL00 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr3Q8BL00 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr3Q8BL00 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr3Q8BL00 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdhr3Q8BL00 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr3Q8BL00 Gm45855-201ENSMUST00000212546 880 ntBASIC20.23■□□□□ 0.83
Cdhr3Q8BL00 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdhr3Q8BL00 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdhr3Q8BL00 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr3Q8BL00 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr3Q8BL00 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdhr3Q8BL00 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdhr3Q8BL00 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdhr3Q8BL00 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdhr3Q8BL00 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr3Q8BL00 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr3Q8BL00 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr3Q8BL00 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr3Q8BL00 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdhr3Q8BL00 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr3Q8BL00 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr3Q8BL00 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdhr3Q8BL00 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr3Q8BL00 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Cdhr3Q8BL00 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdhr3Q8BL00 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.18■□□□□ 0.82
Cdhr3Q8BL00 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdhr3Q8BL00 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdhr3Q8BL00 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdhr3Q8BL00 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cdhr3Q8BL00 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr3Q8BL00 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr3Q8BL00 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr3Q8BL00 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr3Q8BL00 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdhr3Q8BL00 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cdhr3Q8BL00 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr3Q8BL00 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Cdhr3Q8BL00 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdhr3Q8BL00 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr3Q8BL00 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr3Q8BL00 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdhr3Q8BL00 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.13■□□□□ 0.81
Cdhr3Q8BL00 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cdhr3Q8BL00 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr3Q8BL00 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr3Q8BL00 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr3Q8BL00 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cdhr3Q8BL00 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdhr3Q8BL00 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Cdhr3Q8BL00 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr3Q8BL00 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cdhr3Q8BL00 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cdhr3Q8BL00 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdhr3Q8BL00 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr3Q8BL00 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdhr3Q8BL00 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdhr3Q8BL00 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdhr3Q8BL00 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdhr3Q8BL00 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cdhr3Q8BL00 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr3Q8BL00 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr3Q8BL00 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr3Q8BL00 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr3Q8BL00 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdhr3Q8BL00 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdhr3Q8BL00 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdhr3Q8BL00 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdhr3Q8BL00 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cdhr3Q8BL00 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdhr3Q8BL00 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdhr3Q8BL00 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdhr3Q8BL00 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdhr3Q8BL00 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdhr3Q8BL00 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdhr3Q8BL00 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdhr3Q8BL00 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdhr3Q8BL00 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdhr3Q8BL00 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdhr3Q8BL00 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdhr3Q8BL00 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdhr3Q8BL00 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdhr3Q8BL00 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms