Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Prpf38bQ80SY5 Gm4799-201ENSMUST00000095396 657 ntBASIC24.26■■□□□ 1.47
Prpf38bQ80SY5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Prpf38bQ80SY5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Prpf38bQ80SY5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.25■■□□□ 1.47
Prpf38bQ80SY5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Prpf38bQ80SY5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Prpf38bQ80SY5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Prpf38bQ80SY5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.23■■□□□ 1.47
Prpf38bQ80SY5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Prpf38bQ80SY5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Prpf38bQ80SY5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Prpf38bQ80SY5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Prpf38bQ80SY5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Prpf38bQ80SY5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Prpf38bQ80SY5 Particl-201ENSMUST00000205370 1560 ntBASIC24.2■■□□□ 1.47
Prpf38bQ80SY5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Prpf38bQ80SY5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Prpf38bQ80SY5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.19■■□□□ 1.46
Prpf38bQ80SY5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Prpf38bQ80SY5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.18■■□□□ 1.46
Prpf38bQ80SY5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.18■■□□□ 1.46
Prpf38bQ80SY5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.17■■□□□ 1.46
Prpf38bQ80SY5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Prpf38bQ80SY5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Prpf38bQ80SY5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Prpf38bQ80SY5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Prpf38bQ80SY5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Prpf38bQ80SY5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.15■■□□□ 1.46
Prpf38bQ80SY5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Prpf38bQ80SY5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.15■■□□□ 1.46
Prpf38bQ80SY5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Prpf38bQ80SY5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Prpf38bQ80SY5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.14■■□□□ 1.45
Prpf38bQ80SY5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Prpf38bQ80SY5 Gm16437-201ENSMUST00000025669 507 ntBASIC24.13■■□□□ 1.45
Prpf38bQ80SY5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Prpf38bQ80SY5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Prpf38bQ80SY5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Prpf38bQ80SY5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.12■■□□□ 1.45
Prpf38bQ80SY5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Prpf38bQ80SY5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf38bQ80SY5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Prpf38bQ80SY5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.1■■□□□ 1.45
Prpf38bQ80SY5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Prpf38bQ80SY5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf38bQ80SY5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf38bQ80SY5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Prpf38bQ80SY5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Prpf38bQ80SY5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Prpf38bQ80SY5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.09■■□□□ 1.45
Prpf38bQ80SY5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Prpf38bQ80SY5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Prpf38bQ80SY5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Prpf38bQ80SY5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Prpf38bQ80SY5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf38bQ80SY5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Prpf38bQ80SY5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.06■■□□□ 1.44
Prpf38bQ80SY5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.06■■□□□ 1.44
Prpf38bQ80SY5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.06■■□□□ 1.44
Prpf38bQ80SY5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Prpf38bQ80SY5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Prpf38bQ80SY5 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.04■■□□□ 1.44
Prpf38bQ80SY5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Prpf38bQ80SY5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Prpf38bQ80SY5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Prpf38bQ80SY5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Prpf38bQ80SY5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Prpf38bQ80SY5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Prpf38bQ80SY5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Prpf38bQ80SY5 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.01■■□□□ 1.43
Prpf38bQ80SY5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Prpf38bQ80SY5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Prpf38bQ80SY5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Prpf38bQ80SY5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf38bQ80SY5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf38bQ80SY5 Gm15546-201ENSMUST00000122095 826 ntBASIC23.99■■□□□ 1.43
Prpf38bQ80SY5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Prpf38bQ80SY5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf38bQ80SY5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf38bQ80SY5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prpf38bQ80SY5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf38bQ80SY5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf38bQ80SY5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf38bQ80SY5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prpf38bQ80SY5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Prpf38bQ80SY5 Gm27502-201ENSMUST00000183495 199 ntBASIC23.96■■□□□ 1.43
Prpf38bQ80SY5 Gm5921-201ENSMUST00000075898 882 ntBASIC23.96■■□□□ 1.43
Prpf38bQ80SY5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Prpf38bQ80SY5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf38bQ80SY5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf38bQ80SY5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prpf38bQ80SY5 Gm14523-201ENSMUST00000117260 558 ntBASIC23.95■■□□□ 1.42
Prpf38bQ80SY5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.95■■□□□ 1.42
Prpf38bQ80SY5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf38bQ80SY5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf38bQ80SY5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf38bQ80SY5 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.94■■□□□ 1.42
Prpf38bQ80SY5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Prpf38bQ80SY5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms