Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pds5aQ6A026 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pds5aQ6A026 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pds5aQ6A026 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pds5aQ6A026 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Pds5aQ6A026 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pds5aQ6A026 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pds5aQ6A026 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Pds5aQ6A026 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pds5aQ6A026 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pds5aQ6A026 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pds5aQ6A026 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pds5aQ6A026 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.16■■□□□ 1.62
Pds5aQ6A026 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pds5aQ6A026 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pds5aQ6A026 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.13■■□□□ 1.61
Pds5aQ6A026 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pds5aQ6A026 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pds5aQ6A026 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pds5aQ6A026 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.11■■□□□ 1.61
Pds5aQ6A026 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pds5aQ6A026 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pds5aQ6A026 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Pds5aQ6A026 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.1■■□□□ 1.61
Pds5aQ6A026 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pds5aQ6A026 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.09■■□□□ 1.61
Pds5aQ6A026 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pds5aQ6A026 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.08■■□□□ 1.6
Pds5aQ6A026 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pds5aQ6A026 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pds5aQ6A026 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pds5aQ6A026 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pds5aQ6A026 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pds5aQ6A026 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Pds5aQ6A026 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pds5aQ6A026 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pds5aQ6A026 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pds5aQ6A026 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pds5aQ6A026 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.02■■□□□ 1.6
Pds5aQ6A026 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Gm4799-201ENSMUST00000095396 657 ntBASIC25.02■■□□□ 1.6
Pds5aQ6A026 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pds5aQ6A026 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.01■■□□□ 1.59
Pds5aQ6A026 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.01■■□□□ 1.59
Pds5aQ6A026 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pds5aQ6A026 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.01■■□□□ 1.59
Pds5aQ6A026 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
Pds5aQ6A026 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
Pds5aQ6A026 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pds5aQ6A026 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pds5aQ6A026 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.99■■□□□ 1.59
Pds5aQ6A026 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.99■■□□□ 1.59
Pds5aQ6A026 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pds5aQ6A026 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pds5aQ6A026 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pds5aQ6A026 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pds5aQ6A026 Mir3960-201ENSMUST00000198213 73 ntBASIC24.95■■□□□ 1.58
Pds5aQ6A026 Gm45364-201ENSMUST00000210883 159 ntBASIC24.95■■□□□ 1.58
Pds5aQ6A026 Gm6311-201ENSMUST00000073790 878 ntBASIC24.95■■□□□ 1.58
Pds5aQ6A026 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pds5aQ6A026 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Pds5aQ6A026 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.93■■□□□ 1.58
Pds5aQ6A026 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.93■■□□□ 1.58
Pds5aQ6A026 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms