Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Clcn1Q64347 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.89■■■□□ 2.38
Clcn1Q64347 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.89■■■□□ 2.38
Clcn1Q64347 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Clcn1Q64347 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Clcn1Q64347 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Clcn1Q64347 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC29.86■■■□□ 2.37
Clcn1Q64347 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Clcn1Q64347 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Clcn1Q64347 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Clcn1Q64347 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Clcn1Q64347 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
Clcn1Q64347 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
Clcn1Q64347 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Clcn1Q64347 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Clcn1Q64347 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Clcn1Q64347 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Clcn1Q64347 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Clcn1Q64347 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Clcn1Q64347 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Clcn1Q64347 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
Clcn1Q64347 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Clcn1Q64347 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Clcn1Q64347 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Clcn1Q64347 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Clcn1Q64347 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.77■■■□□ 2.36
Clcn1Q64347 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC29.77■■■□□ 2.36
Clcn1Q64347 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Clcn1Q64347 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Clcn1Q64347 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.36
Clcn1Q64347 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Clcn1Q64347 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Clcn1Q64347 Gm7332-201ENSMUST00000118351 454 ntBASIC29.75■■■□□ 2.35
Clcn1Q64347 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
Clcn1Q64347 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.74■■■□□ 2.35
Clcn1Q64347 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.74■■■□□ 2.35
Clcn1Q64347 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Clcn1Q64347 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.73■■■□□ 2.35
Clcn1Q64347 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC29.73■■■□□ 2.35
Clcn1Q64347 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.73■■■□□ 2.35
Clcn1Q64347 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Clcn1Q64347 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Clcn1Q64347 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Clcn1Q64347 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Clcn1Q64347 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.71■■■□□ 2.35
Clcn1Q64347 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC29.7■■■□□ 2.35
Clcn1Q64347 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Clcn1Q64347 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Clcn1Q64347 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Clcn1Q64347 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.69■■■□□ 2.34
Clcn1Q64347 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Clcn1Q64347 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Clcn1Q64347 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Clcn1Q64347 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Clcn1Q64347 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Clcn1Q64347 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Clcn1Q64347 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Clcn1Q64347 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Clcn1Q64347 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC29.65■■■□□ 2.34
Clcn1Q64347 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Clcn1Q64347 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Clcn1Q64347 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Clcn1Q64347 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Clcn1Q64347 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Clcn1Q64347 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Clcn1Q64347 Gm9910-201ENSMUST00000195385 1550 ntBASIC29.63■■■□□ 2.33
Clcn1Q64347 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Clcn1Q64347 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC29.63■■■□□ 2.33
Clcn1Q64347 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
Clcn1Q64347 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Clcn1Q64347 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Clcn1Q64347 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.62■■■□□ 2.33
Clcn1Q64347 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Clcn1Q64347 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29.61■■■□□ 2.33
Clcn1Q64347 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Clcn1Q64347 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Clcn1Q64347 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Clcn1Q64347 Gm14523-201ENSMUST00000117260 558 ntBASIC29.6■■■□□ 2.33
Clcn1Q64347 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Clcn1Q64347 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
Clcn1Q64347 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Clcn1Q64347 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Clcn1Q64347 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Clcn1Q64347 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC29.57■■■□□ 2.32
Clcn1Q64347 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Clcn1Q64347 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.57■■■□□ 2.32
Clcn1Q64347 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Clcn1Q64347 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Clcn1Q64347 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
Clcn1Q64347 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Clcn1Q64347 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC29.54■■■□□ 2.32
Clcn1Q64347 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.54■■■□□ 2.32
Clcn1Q64347 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Clcn1Q64347 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Clcn1Q64347 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Clcn1Q64347 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
Clcn1Q64347 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Clcn1Q64347 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC29.51■■■□□ 2.31
Clcn1Q64347 Gm9812-201ENSMUST00000061934 968 ntBASIC29.51■■■□□ 2.31
Clcn1Q64347 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.49■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms